Highlighted
Open highlighted repo slot
Put your repository first
Promote a GitHub repo at the top of Awesome repository list views for 7 days.
Awesome List
Awesome Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
danielecook/Awesome-Bioinformatics
#awesome
#awesome-list
#bioinformatics
- List stars
- 4,329
- README repos
- 132
- Indexed repos
- 127
- List commits
- 273
- Forks
- 742
- Open issues
- 46
Tracked list growth
GitHub stars and default-branch commits for danielecook/Awesome-Bioinformatics.
Latest scan 2026-10-22 10:49
Likes history
GitHub starsCommits history
Default branch commits
Latest repo push 2026-10-22
google/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
GitHub topics
- Updated
- 2026-09-30
- Lists
- 1 list mention
- First commit
- 2017-12-01
- License
- BSD-3-Clause
- Issues
- 8 open
3,824
stars
- Forks
- 806
- Commits
- 3,378 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
pysam-developers/pysam
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
- Updated
- 2026-10-15
- Lists
- 1 list mention
- First commit
- 2009-08-13
- License
- MIT
- Issues
- 270 open
911
stars
- Forks
- 304
- Commits
- 2,469 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
OpenGene/AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
Stack
GitHub topics
- Updated
- 2020-05-14
- Lists
- 1 list mention
- First commit
- 2015-08-04
- License
- MIT
- Issues
- 28 open
214
stars
- Forks
- 50
- Commits
- 200 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
telatin/seqfu2
:rocket: seqfu - Sequece Fastx Utilities
AI dev
GitHub topics
- Updated
- 2026-10-13
- Lists
- 1 list mention
- First commit
- 2020-11-26
- License
- GPL-3.0
- Issues
- 0 open
132
stars
- Forks
- 10
- Commits
- 785 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
fmalmeida/ngs-preprocess
A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
- Updated
- 2024-06-30
- Lists
- 1 list mention
- First commit
- 2019-09-19
- License
- GPL-3.0
- Issues
- 4 open
- Forks
- 7
- Commits
- 272 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
SeqWare/seqware
This is the SeqWare Project's main repo.
- Updated
- 2018-07-09
- Lists
- 1 list mention
- First commit
- 2012-05-11
- License
- GPL-3.0
- Issues
- 5 open
30
stars
- Forks
- 17
- Commits
- 3,206 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%
chgibb/PHAT
Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
Stack
GitHub topics
- Updated
- 2022-12-12
- Lists
- 1 list mention
- First commit
- 2016-10-11
- License
- GPL-3.0
- Issues
- 76 open
17
stars
- Forks
- 2
- Commits
- 5,236 commits
- Star growth, last 7 days
- 0 0.0%
- Commit velocity, last 7 days
- 0 0.0%