github Not archived

fmalmeida/ngs-preprocess

A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

1 awesome list

Quick read

Stars
37
Forks
7
Open issues
4
Commits
272

Activity and growth

Latest capture 2026-10-22 09:41

Stars · last 7 days
0 0.0%
Commits · last 7 days
0 0.0%
Stars since tracking
0
Stored snapshots
1

Classification

Metadata

Language
Nextflow
License
GPL-3.0
Default branch
master
Created
2019-09-19
First commit
2019-09-19
Last pushed
2024-06-30
GitHub updated
2026-08-30
Last synced
2026-10-22 09:41
Stack scanned
2026-10-22 09:41
Archived
No

Archive status reflects the last catalog sync, not a maintenance assessment. Check recent releases, issue responses, and fit for your project with the repository shortlisting checklist.

AI development signals

0 paths

Agent instructions and tool configuration found in this repository.

No config files detected.

Growth history

Tracked growth

1 observed capture since 2026-10-22. Observed captures are shown by default.

Stars from first capture 0

Chart data

Observed captures only

Time horizon

All tracked data

Custom date range

Stars history

Observed snapshots

Commits history

Observed snapshots

Similar repositories

Nearest indexed repositories by embedding similarity.

fmalmeida/bacannot

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

108 stars
Nextflow 1 awesome list

nextflow-io/nextflow

A workflow language for data-driven computational pipelines

3,515 stars
Groovy 1 awesome list

bcbio/bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

1,031 stars
Python 2 awesome lists

bactopia/bactopia

A flexible pipeline for complete analysis of bacterial genomes

523 stars
Nextflow 1 awesome list

scipipe/scipipe

Robust, flexible and resource-efficient pipelines using Go and the commandline

1,110 stars
Go 1 awesome list

ruanjue/wtdbg2

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly

533 stars
C 1 awesome list