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Awesome Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

danielecook/Awesome-Bioinformatics #awesome #awesome-list #bioinformatics
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Latest scan 2026-10-22 10:49

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Topic: htslib
Latest repo push 2026-10-22

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pysam-developers/pysam

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.

Stack
Cython PEP 517 pip
GitHub topics
#bioinformatics #htslib #ngs #python
Updated
2026-10-15
Lists
1 list mention
First commit
2009-08-13
License
MIT
Issues
270 open
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911
stars
Forks
304
Commits
2,469 commits
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0 0.0%
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0 0.0%
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