github Not archived

brentp/cyvcf2

cython + htslib == fast VCF and BCF processing

1 awesome list

Quick read

Stars
450
Forks
79
Open issues
51
Commits
552

Activity and growth

Latest capture 2026-10-22 09:39

Stars · last 7 days
0 0.0%
Commits · last 7 days
0 0.0%
Stars since tracking
0
Stored snapshots
1

Classification

Metadata

Language
Cython
License
MIT
Default branch
main
Created
2015-08-12
First commit
2015-08-12
Last pushed
2026-09-10
GitHub updated
2026-09-27
Last synced
2026-10-22 09:39
Stack scanned
2026-10-22 09:39
Archived
No

Archive status reflects the last catalog sync, not a maintenance assessment. Check recent releases, issue responses, and fit for your project with the repository shortlisting checklist.

AI development signals

0 paths

Agent instructions and tool configuration found in this repository.

No config files detected.

Growth history

Tracked growth

1 observed capture since 2026-10-22. Observed captures are shown by default.

Stars from first capture 0

Chart data

Observed captures only

Time horizon

All tracked data

Custom date range

Stars history

Observed snapshots

Commits history

Observed snapshots

Similar repositories

Nearest indexed repositories by embedding similarity.

arq5x/cyvcf

A fast Python library for VCF files leveraging Cython for speed.

54 stars
Python 1 awesome list

vcflib/vcflib

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

687 stars
C++ 1 awesome list

samtools/bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

901 stars
C 1 awesome list

jamescasbon/PyVCF

A Variant Call Format reader for Python.

420 stars
Python 1 awesome list

vcftools/vcftools

A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

565 stars
C++ 1 awesome list

bcbio/bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

1,031 stars
Python 2 awesome lists