github Not archived

samtools/bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

1 awesome list

Quick read

Stars
901
Forks
284
Open issues
342
Commits
3,338

Activity and growth

Latest capture 2026-10-22 09:44

Stars · last 7 days
0 0.0%
Commits · last 7 days
0 0.0%
Stars since tracking
0
Stored snapshots
1

Metadata

Language
C
License
NOASSERTION
Default branch
develop
Created
2013-07-12
First commit
2012-04-29
Last pushed
2026-10-21
GitHub updated
2026-10-21
Last synced
2026-10-22 09:44
Stack scanned
2026-10-22 09:44
Archived
No

Archive status reflects the last catalog sync, not a maintenance assessment. Check recent releases, issue responses, and fit for your project with the repository shortlisting checklist.

AI development signals

0 paths

Agent instructions and tool configuration found in this repository.

No config files detected.

Growth history

Tracked growth

1 observed capture since 2026-10-22. Observed captures are shown by default.

Stars from first capture 0

Chart data

Observed captures only

Time horizon

All tracked data

Custom date range

Stars history

Observed snapshots

Commits history

Observed snapshots

Similar repositories

Nearest indexed repositories by embedding similarity.

samtools/samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

1,969 stars
C 1 awesome list

vcftools/vcftools

A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

565 stars
C++ 1 awesome list

bcbio/bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

1,031 stars
Python 2 awesome lists

arq5x/bedtools2

bedtools - the swiss army knife for genome arithmetic

1,055 stars
C 1 awesome list

shenwei356/seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

1,605 stars
Go 1 awesome list

bactopia/bactopia

A flexible pipeline for complete analysis of bacterial genomes

523 stars
Nextflow 1 awesome list