github Not archived

brentp/somalier

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

1 awesome list

Quick read

Stars
341
Forks
50
Open issues
64
Commits
323

Activity and growth

Latest capture 2026-10-22 09:39

Stars · last 7 days
0 0.0%
Commits · last 7 days
0 0.0%
Stars since tracking
0
Stored snapshots
1

Classification

Metadata

Language
Nim
License
MIT
Default branch
master
Created
2018-08-07
First commit
2018-07-17
Last pushed
2026-10-20
GitHub updated
2026-10-20
Last synced
2026-10-22 09:39
Stack scanned
2026-10-22 09:39
Archived
No

Archive status reflects the last catalog sync, not a maintenance assessment. Check recent releases, issue responses, and fit for your project with the repository shortlisting checklist.

AI development signals

0 paths

Agent instructions and tool configuration found in this repository.

No config files detected.

Growth history

Tracked growth

1 observed capture since 2026-10-22. Observed captures are shown by default.

Stars from first capture 0

Chart data

Observed captures only

Time horizon

All tracked data

Custom date range

Stars history

Observed snapshots

Commits history

Observed snapshots

Similar repositories

Nearest indexed repositories by embedding similarity.

brentp/smoove

structural variant calling and genotyping with existing tools, but, smoothly.

267 stars
Go 1 awesome list

dellytools/delly

DELLY2: Structural variant discovery by integrated paired-end and split-read analysis

538 stars
C++ 1 awesome list

freebayes/freebayes

Bayesian haplotype-based genetic polymorphism discovery and genotyping.

880 stars
C++ 1 awesome list

vcflib/vcflib

C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings

687 stars
C++ 1 awesome list

bcbio/bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

1,031 stars
Python 2 awesome lists

ClawBio/ClawBio

🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.

1,161 stars
Python 1 awesome list