brentp/smoove
structural variant calling and genotyping with existing tools, but, smoothly.
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"
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structural variant calling and genotyping with existing tools, but, smoothly.
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.