GRIDSS: the Genomic Rearrangement IDentification Software Suite
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Bayesian haplotype-based genetic polymorphism discovery and genotyping.
SKESA assembler
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
structural variant calling and genotyping with existing tools, but, smoothly.
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
