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RNAseq analysis notes from Ming Tang
The Leek group guide to genomics papers
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
A fast and sensitive gapped read aligner
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
